{"id":703,"date":"2022-12-14T19:00:04","date_gmt":"2022-12-14T10:00:04","guid":{"rendered":"https:\/\/nshalnote.com\/?p=703"},"modified":"2022-12-15T14:31:18","modified_gmt":"2022-12-15T05:31:18","slug":"%e3%80%90cat12%e3%80%91%e3%83%87%e3%83%bc%e3%82%bf%e5%89%8d%e5%87%a6%e7%90%86%e3%81%ae%e6%89%8b%e9%a0%86%e3%83%bb%e5%a4%96%e3%82%8c%e5%80%a4%e3%81%ae%e8%a9%95%e4%be%a1","status":"publish","type":"post","link":"https:\/\/nshalnote.com\/%e3%80%90cat12%e3%80%91%e3%83%87%e3%83%bc%e3%82%bf%e5%89%8d%e5%87%a6%e7%90%86%e3%81%ae%e6%89%8b%e9%a0%86%e3%83%bb%e5%a4%96%e3%82%8c%e5%80%a4%e3%81%ae%e8%a9%95%e4%be%a1\/","title":{"rendered":"\u3010CAT12\u3011\u30c7\u30fc\u30bf\u524d\u51e6\u7406\u306e\u624b\u9806\u30fb\u5916\u308c\u5024\u306e\u8a55\u4fa1"},"content":{"rendered":"\n

\u8868\u9762\u5f62\u614b\u8a08\u6e2c\u6cd5\u3067\u3042\u308b surface-based morphometry (SBM)\u304c\u8133\u8868\u306e\u89e3\u6790\u306b\u304a\u3044\u3066\u3001voxcel-based morphometry (VBM)\u3088\u308a\u8a73\u7d30\u306b\u5f62\u614b\u60c5\u5831\u3092\u8a55\u4fa1\u3067\u304d\u308b\u3068\u306e\u5831\u544a\u304c\u3042\u30ea\u307e\u3059\u3002

FreeSurfer\u3092\u7528\u3044\u305fSBM\u306f\u4ee5\u524d\u306b\u8a18\u8f09\u3057\u307e\u3057\u305f\u304c\u3001CAT12\u3092\u7528\u3044\u308b\u3053\u3068\u3067GUI\u4e0a\u3067\u89e3\u6790\u53ef\u80fd\u3068\u306e\u3053\u3068\u3067\u3057\u305f\u306e\u3067\u3001\u4f7f\u7528\u3057\u3066\u307f\u307e\u3057\u305f\u3002\u672c\u30da\u30fc\u30b8\u3067\u306f\u89e3\u6790\u524d\u306e\u30c7\u30fc\u30bf\u524d\u51e6\u7406\u306b\u3064\u3044\u3066\u8a18\u8f09\u3057\u307e\u3059\u3002<\/p>\n\n\n

\t\t\t
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\n\t\t\t\t\t\u3042\u308f\u305b\u3066\u8aad\u307f\u305f\u3044<\/span>\n\t\t\t\t\t
\"\"<\/figure><\/div>\t\t\t\t\t
\n\t\t\t\t\t\t\u3010FSGD file\u3011FreeSurfer\u3092\u7528\u3044\u305fSurface group analysis #1<\/a>\n\t\t\t\t\t\t\u8133\u76ae\u8cea\u306e\u5f62\u614b\u89e3\u6790\u3067\u306f\u3001\u5f93\u6765\u306eVoxel-based morphometry\u3088\u308a\u3082Surface-based morphometry (Surface group analysis)\u3092\u7528\u3044\u308b\u3053\u3068\u3067\u3088\u308a\u8a73\u7d30\u306a\u89e3\u6790\u304c\u53ef\u80fd\u3068\u3055\u308c\u3066\u3044\u307e\u3059\u3002…<\/span>\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t<\/div>\n\n\n

CAT\u306e\u5c0e\u5165\u65b9\u6cd5\u306b\u3064\u3044\u3066\u306f\u3053\u3061\u3089<\/p>\n\n\n

\t\t\t
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\n\t\t\t\t\t\u3042\u308f\u305b\u3066\u8aad\u307f\u305f\u3044<\/span>\n\t\t\t\t\t
\"\"<\/figure><\/div>\t\t\t\t\t
\n\t\t\t\t\t\tSPM\u62e1\u5f35\u30c4\u30fc\u30eb”CAT12″\u306e\u5c0e\u5165\u65b9\u6cd5\u307e\u3068\u3081<\/a>\n\t\t\t\t\t\tCAT\u306fJena University Hospital\u3067\u958b\u767a\u3055\u308c\u305fSPM12\u306e\u62e1\u5f35\u30d1\u30c3\u30b1\u30fc\u30b8\u3067\u3001\u8133\u753b\u50cf\u89e3\u6790\u306b\u304a\u3044\u3066Voxel-based morphometry (VBM), Surface-based morphometry (SBM), Deformati…<\/span>\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t<\/div>\n\n\n

\u30c7\u30fc\u30bf\u524d\u51e6\u7406(Segmentation)<\/h2>\n\n\n\n

CAT\u3067\u306fvoxel-based\u51e6\u7406\u3068surfase-base\u51e6\u7406\u306e\uff12\u3064\u306e\u30b9\u30c6\u30c3\u30d7\u304c\u3042\u308a\u3001SBM\u306b\u304a\u3044\u3066\u3082voxel-based\u51e6\u7406\u3092\u4ecb\u3059\u308b\u5fc5\u8981\u304c\u3042\u308a\u307e\u3059\u3002<\/p>\n\n\n\n

\"\"
\u5f15\u7528\uff1aCAT12 \u30de\u30cb\u30e5\u30a2\u30eb<\/a><\/figcaption><\/figure>\n\n\n\n

\u4e0a\u8a18\u306e\u30d5\u30ed\u30fc\u30c1\u30e3\u30fc\u30c8\u306b\u5f93\u3044\u3001\u307e\u305a\u306fTissue segmentation\u3092\u884c\u3046\u5fc5\u8981\u304c\u3042\u308a\u307e\u3059\u3002”CAT12″\u304b\u3089”segment<\/strong>“\u3092\u30af\u30ea\u30c3\u30af\u3057\u307e\u3057\u3087\u3046\u3002<\/p>\n\n\n\n

\"\"<\/figure>\n\n\n\n

CAT12\u3067\u306f\u305d\u308c\u305e\u308c\u306e\u51e6\u7406\u306b\u969b\u3057\u3001Batch Editor<\/strong>\u304c\u8d77\u52d5\u3057\u307e\u3059\u3002 ” <-X<\/strong> “\u306e\u8868\u793a\u306f\u30c7\u30fc\u30bf\u306e\u9078\u629e\u304c\u5fc5\u8981\u3067\u3042\u308b\u3053\u3068\u3092\u6307\u3057\u3066\u3044\u307e\u3059\u3002”Volumes”\u3092\u30af\u30ea\u30c3\u30af\u3057\u3066\u30d5\u30a1\u30a4\u30eb\u3092\u9078\u629e\u3057\u307e\u3057\u3087\u3046\u3002\u30c7\u30a3\u30ec\u30af\u30c8\u30ea\u9078\u629e\u5f8c\u3001\u5de6\u306e\u30ea\u30b9\u30c8\u3092\u30af\u30ea\u30c3\u30af\u3059\u308b\u3053\u3068\u3067\u8ffd\u52a0\u3067\u304d\u307e\u3059\u3002\u8ffd\u52a0\u5f8c\u306b”done”\u3092\u30af\u30ea\u30c3\u30af\u3057\u307e\u3057\u3087\u3046\u3002Current Item\u306e\u6b04\u306b\u30d5\u30a1\u30a4\u30eb\u540d\u304c\u8868\u793a\u3055\u308c\u305f\u3089\u3001\u5de6\u4e0a\u306e\u7dd1\u77e2\u5370\u3092\u30af\u30ea\u30c3\u30af\u3057\u3066\u51e6\u7406\u958b\u59cb\u3067\u3059\u3002<\/p>\n\n\n\n

\"\"<\/figure>\n\n\n\n

SBM\u3092\u884c\u3046\u5834\u5408\u306f\u3001”Surface and thickness estimation”\u304c”Yes”\u306b\u306a\u3063\u3066\u3044\u308b\u3053\u3068\u3092\u78ba\u8a8d\u3057\u307e\u3057\u3087\u3046\u3002<\/p>\n\n\n\n

\"\"<\/figure>\n\n\n\n

\u521d\u56de\u306e\u51e6\u7406\u6642\u306f\u7e70\u308a\u8fd4\u3057\u30bb\u30ad\u30e5\u30ea\u30c6\u30a3\u30a8\u30e9\u30fc\u304c\u51fa\u308b\u53ef\u80fd\u6027\u304c\u3042\u308a\u307e\u3059\u306e\u3067\u3001Mac\u30e6\u30fc\u30b6\u30fc\u3067\u8a8d\u8a3c\u304c\u901a\u3089\u305a\u51e6\u7406\u304c\u3067\u304d\u306a\u3044\u5834\u5408\u306f\u3001spm\u306e\u30c7\u30a3\u30ec\u30af\u30c8\u30ea\u3092\u958b\u304d\u3001\u4e0b\u8a18\u3092\u30bf\u30fc\u30df\u30ca\u30eb\u306b\u5165\u529b\u3057\u307e\u3057\u3087\u3046\u3002\u53c2\u8003\u306f\u3053\u3061\u3089<\/a>\u3002\u524d\u56de\u3068\u540c\u3058\u3088\u3046\u306b”\u30bb\u30ad\u30e5\u30ea\u30c6\u30a3\u3068\u30d7\u30e9\u30a4\u30d0\u30b7\u30fc”\u304b\u3089\u89e3\u9664\u3059\u308b\u306e\u306f\u306e\u306f\u30ad\u30ea\u304c\u3042\u308a\u307e\u305b\u3093\u3002<\/p>\n\n\n\n

find . -name “*.mexmaci64” -exec xattr -d com.apple.quarantine {} \\;<\/p>\n\n\n\n

\u4eca\u56de\u306f\u30aa\u30d7\u30b7\u30e7\u30f3\u306f\u89e6\u3089\u305a\u3001Default\u8a2d\u5b9a\u3067\u51e6\u7406\u3057\u307e\u3059\u3002
\u4e0b\u8a18\u306e\u3088\u3046\u306b\u8868\u793a\u304c\u3042\u308c\u3070\u6210\u529f\u3067\u3059\u3002<\/p>\n\n\n\n

\"\"
\u4e0a\u8a18\u753b\u50cf\u304b\u3089\u75c7\u4f8b\u6570\u30923\u4f8b\u306b\u5909\u66f4\u3057\u3066\u3044\u307e\u3059\u3002<\/figcaption><\/figure>\n\n\n\n

\u5165\u529b\u3057\u305f\u30d5\u30a1\u30a4\u30eb\u3068\u540c\u3058\u30c7\u30a3\u30ec\u30af\u30c8\u30ea\u306e”report”\u306b\u305d\u308c\u305e\u308c\u306e\u89e3\u6790\u7d50\u679c\u304c\u51fa\u529b\u3055\u308c\u3066\u3044\u307e\u3059\u3002<\/p>\n\n\n\n

\"\"<\/figure>\n\n\n\n

\u524d\u51e6\u7406\u3057\u305f\u30c7\u30fc\u30bf\u306e\u78ba\u8a8d (Option)<\/strong><\/h2>\n\n\n\n

1. Statistical Analysis > Data Quality > Simple slice display \u3092\u9078\u629e\u3057\u3001\u524d\u51e6\u7406\u3067”mri”\u5185\u306b\u51fa\u529b\u3055\u308c\u305f”wm*”\u30d5\u30a1\u30a4\u30eb\u3092\u9078\u629e\u3059\u308b\u3068\u3001MRI\u306e\u30b9\u30e9\u30a4\u30b9\u30c7\u30fc\u30bf\u3092\u78ba\u8a8d\u3059\u308b\u3053\u3068\u304c\u3067\u304d\u307e\u3059\u3002\u4e3b\u306b\u7c97\u5927\u306a\u30a2\u30fc\u30c1\u30d5\u30a1\u30af\u30c8\u3084\u5411\u304d\u306e\u30a8\u30e9\u30fc\u3092\u691c\u51fa\u3059\u308b\u305f\u3081\u306b\u884c\u3044\u307e\u3059\u3002<\/p>\n\n\n\n

2. Statistical Analysis > Get TIV \u3092\u9078\u629e\u3057\u3001\u524d\u51e6\u7406\u3067”report”\u5185\u306b\u51fa\u529b\u3055\u308c\u305f”cat_*.xml”\u30d5\u30a1\u30a4\u30eb\u3092\u9078\u629e\u3059\u308b\u3068\u7dcf\u982d\u84cb\u5185\u5bb9\u7a4d\u3092\u63a8\u5b9a\u3059\u308b\u3053\u3068\u304c\u3067\u304d\u307e\u3059\u3002\u51fa\u529b\u5148\u306fdocument > matlab \u30c7\u30a3\u30ec\u30af\u30c8\u30ea\u5185\u3067\u3059\u3002<\/p>\n\n\n\n

\u30b5\u30f3\u30d7\u30eb\u306e\u5747\u4e00\u6027\u3092\u78ba\u8a8d\u3059\u308b\u3002<\/strong><\/h2>\n\n\n\n

“Data Quality”\u304b\u3089”Check Sample Homogenity”\u3092\u30af\u30ea\u30c3\u30af\u3057\u307e\u3059\u3002<\/p>\n\n\n\n

\"\"<\/figure>\n\n\n\n

“Sample data”\u304b\u3089”mwp1*”file\u3092\u5165\u529b\u3057\u307e\u3059\u3002
“mri”\u30c7\u30a3\u30ec\u30af\u30c8\u30ea\u306b\u51fa\u529b\u3055\u308c\u3066\u3044\u307e\u3059\u3002<\/p>\n\n\n\n

\"\"<\/figure>\n\n\n\n
\n
STEP<\/span><\/div>
\n\n<\/div><\/div>\n\n\n\n
STEP<\/span><\/div>
\n\n<\/div><\/div>\n<\/div>\n\n\n\n

\u51fa\u529b\u304c\u6210\u529f\u3059\u308b\u3068\u4e0b\u8a18\u306e\u3088\u3046\u306a\u30a6\u30a3\u30f3\u30c9\u30a6\u304c\u51fa\u529b\u3055\u308c\u307e\u3059\u3002<\/p>\n\n\n\n

\n
\"\"<\/figure>\n\n\n\n
\"\"<\/figure>\n<\/div>\n\n\n\n

Z score\u3068Image quality\u306b\u5916\u308c\u5024\u304c\u3042\u308b\u306e\u304c\u308f\u304b\u308a\u307e\u3059\u3002<\/p>\n\n\n\n

\u6b21\u306e\u30da\u30fc\u30b8\u3067SBM\u89e3\u6790\u306e\u624b\u9806\u306b\u3064\u3044\u3066\u8a18\u8f09\u3057\u307e\u3059\u3002<\/p>\n\n\n

\t\t\t
\n\t\t\t\t
\n\t\t\t\t\t\u3042\u308f\u305b\u3066\u8aad\u307f\u305f\u3044<\/span>\n\t\t\t\t\t
\"\"<\/figure><\/div>\t\t\t\t\t
\n\t\t\t\t\t\t\u3010CAT12\u3011Surface-based morphometry\u306e\u624b\u9806\u306b\u3064\u3044\u3066<\/a>\n\t\t\t\t\t\tCAT12\u3092\u7528\u3044\u3066Surface-based morphometry(SBM)\u3092\u884c\u3046\u624b\u9806\u3092\u89e3\u8aac\u3057\u307e\u3059\u3002\u30c7\u30fc\u30bf\u306e\u524d\u51e6\u7406\u306f\u524d\u30da\u30fc\u30b8\u3092\u78ba\u8a8d\u3057\u3066\u304f\u3060\u3055\u3044\u3002 \u516c\u5f0f\u30b5\u30a4\u30c8\u306f\u3053\u3061\u3089 Surface resample \u524d\u51e6\u7406(se…<\/span>\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t<\/div>","protected":false},"excerpt":{"rendered":"

\u8868\u9762\u5f62\u614b\u8a08\u6e2c\u6cd5\u3067\u3042\u308b surface-based morphometry (SBM)\u304c\u8133\u8868\u306e\u89e3\u6790\u306b\u304a\u3044\u3066\u3001voxcel-based morphometry (VBM)\u3088\u308a\u8a73\u7d30\u306b\u5f62\u614b\u60c5\u5831\u3092\u8a55\u4fa1\u3067\u304d\u308b\u3068\u306e\u5831\u544a\u304c\u3042\u30ea\u307e\u3059\u3002 F […]<\/p>\n","protected":false},"author":1,"featured_media":773,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"swell_btn_cv_data":"","footnotes":""},"categories":[96,3],"tags":[98,99,97,100,101],"class_list":["post-703","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-image-analysis","category-spm","tag-cat","tag-sbm","tag-spm","tag-vbm","tag-101"],"_links":{"self":[{"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/posts\/703","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/comments?post=703"}],"version-history":[{"count":12,"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/posts\/703\/revisions"}],"predecessor-version":[{"id":802,"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/posts\/703\/revisions\/802"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/media\/773"}],"wp:attachment":[{"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/media?parent=703"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/categories?post=703"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/nshalnote.com\/wp-json\/wp\/v2\/tags?post=703"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}